DNA complexity computing
This is a collection of methods to compute the composition and complexity of a DNA sequence(s) from a Fasta file.
The SeqComplex.pm is a Perl Module with all methods, 2 examples scripts are added: (1) compSeq.pl compute the methods in a windowed mode. (2) profileComplexSeq.pl compute the methods using the whole sequence.
Copyright (C) 2009 by Juan Caballero, Institute for Systems Biology
All code is free software; you can redistribute it and/or modify it under the same terms as Perl itself, either Perl version 5.8.8 or, at your option, any later version of Perl 5 you may have available.